Type: Package
Package: gcplyr
Title: Wrangle and Analyze Growth Curve Data
Version: 1.13.1
Date: 2026-10-16
Authors@R: person("Mike", "Blazanin", , "mikeblazanin@gmail.com",
               role = c("aut", "cre"), 
               comment = c(ORCID = "0000-0003-4630-6235"))
Description: Easy importing, wrangling, and model-free analysis of
        microbial growth curve data, as commonly output by plate
        readers. Tools for flexibly importing all the common data
        formats output by plate readers and reshaping them into 'tidy'
        formats for analyses. Tools for importing experimental designs
        from files or generating them in R and merging design
        information with density data, making it easy to analyze with
        'gcplyr' and 'tidyverse' or 'dplyr' functions, and to plot with
        'ggplot2'. Streamlines extracting parameters like growth
        rate/doubling time, maximum density (carrying capacity), lag
        time, area under the curve, diauxic shifts, extinction, and
        more without fitting an equation for growth to your data. Has
        several methods to deal with noise in growth curve data. See
        methods at <https://mikeblazanin.github.io/gcplyr/>.
License: MIT + file LICENSE
URL: https://mikeblazanin.github.io/gcplyr/,
        https://github.com/mikeblazanin/gcplyr/
Depends: R (>= 2.10)
Imports: dplyr, rlang, stats, tidyr, tools, utils
Suggests: caret, cellranger, ggplot2, knitr, lubridate, mgcv, readxl,
        rmarkdown, sf, testthat (>= 3.0.0), xlsx
VignetteBuilder: knitr
Config/testthat/edition: 3
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
Config/roxygen2/version: 8.1.1
Config/pak/sysreqs: libicu-dev
Repository: https://mikeblazanin.r-universe.dev
Date/Publication: 2026-10-16 18:17:10 UTC
RemoteUrl: https://github.com/mikeblazanin/gcplyr
RemoteRef: HEAD
RemoteSha: dc8ceb3a26388502c66594bf0fb31c7bca7075a5
NeedsCompilation: no
Packaged: 2026-10-16 21:39:30 UTC; root
Author: Mike Blazanin [aut, cre] (ORCID:
    <https://orcid.org/0000-0003-4630-6235>)
Maintainer: Mike Blazanin <mikeblazanin@gmail.com>